God made a covenant with Israel 4,000 years ago, and since God is unchanging, that covenant still stands today. Is He ticked at what was done to His Son? Yes, but He also knew that it would happen long before the covenant was made with Abraham.
The church has a special place in Gods heart but so does Israel. Just like we as christians go through trials and are punished for things we do against His will, the same holds true for Israel. Whenever the tribulation occurs Israel will be subject to the same trials right along with the church. Then those of us that are able to endure, will be with him forever and ever.
Ezekiel 39:25 - Therefore thus says the Lord God, "Now I shall restore the fortunes of Jacob, and have mercy on the whole house of Israel; and I shall be jealous for My holy name. 26 "And they shall forget their disgrace and all their treachery which they perpetrated against Me, when they live securely on their own land with no one to make them afraid. 27 "When I bring them back from the peoples and gather them from the lands of their enemies, then I shall be sanctified through them in the sight of the many nations. 28 "Then they will know that I am the Lord their God because I made them go into exile among the nations, and then gathered them again to their own land; and I will leave none of them there any longer. 29 "And I will not hide My face from them any longer, for I shall have poured out My Spirit on the house of Israel," declares the Lord God.
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